############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 18:65:74:99:109:172 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.02944502033515 H1_P_Y = 77.68949850629734 H1_P_Z = -17.900424842515847 # Orientation: H1_DX_X = 0.32239220293224946 H1_DX_Y = 0.3903935674266421 H1_DX_Z = 0.862354990708802 H1_DY_X = -0.20040668586017318 H1_DY_Y = 0.9184952972549354 H1_DY_Z = -0.3408864168357333 H1_DZ_X = -0.9251488678861506 H1_DZ_Y = -0.06292258284959473 H1_DZ_Z = 0.37435320329405997 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 124.6926591566652 H2_P_Y = 61.118408491505825 H2_P_Z = -38.38014725833341 # Orientation: H2_DX_X = -0.10972031910736746 H2_DX_Y = 0.9851633981482166 H2_DX_Z = -0.1319641258979658 H2_DY_X = -0.6257521191151625 H2_DY_Y = -0.17161657926746443 H2_DY_Z = -0.7609086904112701 H2_DZ_X = -0.7722666229987283 H2_DZ_Y = -9.103128956624573E-4 H2_DZ_Z = 0.6352979099073082 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.6568762733219 H3_P_Y = 79.24810069243293 H3_P_Z = 0.4986608134743431 # Orientation: H3_DX_X = -0.4029199819003111 H3_DX_Y = 0.3432013294494993 H3_DX_Z = -0.848450549914104 H3_DY_X = -0.839495287403679 H3_DY_Y = 0.2306706057030965 H3_DY_Z = 0.4919743225937755 H3_DZ_X = 0.3645588438270124 H3_DZ_Y = 0.9104965234028413 H3_DZ_Z = 0.19517410242870759 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.05541745498314 H4_P_Y = 64.17536054881805 H4_P_Z = -1.6456493862532113 # Orientation: H4_DX_X = 0.7071561667778781 H4_DX_Y = -0.27827809722639785 H4_DX_Z = -0.6499934279606885 H4_DY_X = 0.567205982923241 H4_DY_Y = -0.3255936939300028 H4_DY_Z = 0.7564827290884231 H4_DZ_X = -0.4221463356753077 H4_DZ_Y = -0.9036315881359371 H4_DZ_Z = -0.07240458686327189 ############# END of Description of junction: j4