#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS8HS9
FINGERPRINT = 128
LOOP_LENGTH_SUM = 17
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1122
S1_NAME_ID3 = 1134
S1_NUM_ID5_ORIG =  1122
S1_NUM_ID3_ORIG = 1134
S1_NAME2_ID5 =  1123
S1_NAME2_ID3 = 1133
S1_NUM2_ID5_ORIG =  1123
S1_NUM2_ID3_ORIG = 1133
S1_SQ2 = AGUUGCCAGCG
S1_SQLEN2 = 11
S1_SQ = UAGUUGCCAGCGG
S1_SQLEN = 13
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1140
S2_NAME_ID3 = 1151
S2_NUM_ID5_ORIG =  1140
S2_NUM_ID3_ORIG = 1151
S2_NAME2_ID5 =  1141
S2_NAME2_ID3 = 1150
S2_NUM2_ID5_ORIG =  1141
S2_NUM2_ID3_ORIG = 1150
S2_SQ2 = CGGGCACUCU
S2_SQLEN2 = 10
S2_SQ = CCGGGCACUCUA
S2_SQLEN = 12
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 2
H1_OUTID2 = 11
H1_INID2_ORIG = 1123
H1_OUTID2_ORIG = 1150
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 223.88938475980436
H1_P_Y = 162.67801329968503
H1_P_Z = 8.56347253094848
# Orientation:
H1_DX_X = -0.013898196868865398
H1_DX_Y = -0.6812162814463534
H1_DX_Z = 0.7319502838418845
H1_DY_X = -0.6509662813132877
H1_DY_Y = 0.5618068502842846
H1_DY_Z = 0.5105055960190956
H1_DZ_X = -0.758979407307578
H1_DZ_Y = -0.4693798471026014
H1_DZ_Z = -0.4512569317107218
## Properties of helix 2
H2_INID = 1
H2_OUTID = 13
H2_INID2 = 2
H2_OUTID2 = 12
H2_INID2_ORIG = 1141
H2_OUTID2_ORIG = 1133
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 253.03887040585283
H2_P_Y = 169.4341538109615
H2_P_Z = 11.18715042995408
# Orientation:
H2_DX_X = 0.19361507455306537
H2_DX_Y = 0.6941781980758037
H2_DX_Z = 0.6932747162720148
H2_DY_X = 0.09755373220434649
H2_DY_Y = -0.7167662632542431
H2_DY_Z = 0.6904559313913854
H2_DZ_X = 0.9762153820949493
H2_DZ_Y = -0.06605114061670747
H2_DZ_Z = -0.20649642753427955
#############  END of Description of junction: j41