############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 3 LILLEY = 3HS19 FINGERPRINT = 35:120:154 LOOP_LENGTH_SUM = 19 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 176 S1_NAME_ID3 = 200 S1_NUM_ID5_ORIG = 176 S1_NUM_ID3_ORIG = 200 S1_NAME2_ID5 = 178 S1_NAME2_ID3 = 198 S1_NUM2_ID5_ORIG = 178 S1_NUM2_ID3_ORIG = 198 S1_SQ2 = CAUGUGGACCCGCGUCCAAAG S1_SQLEN2 = 21 S1_SQ = CCCAUGUGGACCCGCGUCCAAAGGG S1_SQLEN = 25 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 141 S2_NAME_ID3 = 146 S2_NUM_ID5_ORIG = 141 S2_NUM_ID3_ORIG = 146 S2_NAME2_ID5 = 143 S2_NAME2_ID3 = 144 S2_NUM2_ID5_ORIG = 143 S2_NUM2_ID3_ORIG = 144 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = AGAGGG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 217 S3_NAME_ID3 = 222 S3_NUM_ID5_ORIG = 217 S3_NUM_ID3_ORIG = 222 S3_NAME2_ID5 = 219 S3_NAME2_ID3 = 220 S3_NUM2_ID5_ORIG = 219 S3_NUM2_ID3_ORIG = 220 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = CCCGCU S3_SQLEN = 6 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 178 H1_OUTID2_ORIG = 144 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 94.76731560751652 H1_P_Y = 38.33932031137017 H1_P_Z = -3.168204131520843 # Orientation: H1_DX_X = -0.6750420655538107 H1_DX_Y = -0.6234655287154709 H1_DX_Z = -0.3944729955730444 H1_DY_X = 0.6909399356273696 H1_DY_Y = -0.3467581270929472 H1_DY_Z = -0.6343191678092599 H1_DZ_X = 0.25868941819891234 H1_DZ_Y = -0.7007492674263176 H1_DZ_Z = 0.6648535546369532 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 219 H2_OUTID2_ORIG = 198 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 87.08490900703839 H2_P_Y = 46.40364070599573 H2_P_Z = 11.839984270341258 # Orientation: H2_DX_X = 0.92269213924871 H2_DX_Y = -0.08053034171906148 H2_DX_Z = 0.3770332614389069 H2_DY_X = -0.18736513572919478 H2_DY_Y = 0.7610255998250537 H2_DY_Z = 0.6210751503031684 H2_DZ_X = -0.33694735802767184 H2_DZ_Y = -0.6437040472713633 H2_DZ_Z = 0.6871037603190935 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 143 H3_OUTID2_ORIG = 220 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 93.89768313218518 H3_P_Y = 59.83437600374101 H3_P_Z = -1.3417832329771735 # Orientation: H3_DX_X = 0.34778400592306014 H3_DX_Y = -0.8566238836555158 H3_DX_Z = -0.3811060314073502 H3_DY_X = -0.6136506276062335 H3_DY_Y = 0.0993475386150493 H3_DY_Z = -0.7833026067935775 H3_DZ_X = 0.7088576672806681 H3_DZ_Y = 0.5062860737982788 H3_DZ_Z = -0.49111629886954855 ############# END of Description of junction: j3