############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 59:65:109:116:127:172 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.66782001200923 H1_P_Y = 77.56786371489761 H1_P_Z = -17.638375940324455 # Orientation: H1_DX_X = 0.31748417471331436 H1_DX_Y = 0.37608151605085993 H1_DX_Z = 0.8704978415202973 H1_DY_X = -0.18067764766331607 H1_DY_Y = 0.925165272640939 H1_DY_Z = -0.33380354392078715 H1_DZ_X = -0.9308917157443375 H1_DZ_Y = -0.051302159643810796 H1_DZ_Z = 0.36167485670755184 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 143.3165171632853 H2_P_Y = 80.24914364084685 H2_P_Z = -26.316762958131715 # Orientation: H2_DX_X = 0.893532258408726 H2_DX_Y = 0.22207407660214074 H2_DX_Z = 0.39023481095909673 H2_DY_X = 0.4228313161681001 H2_DY_Y = -0.7085538845344388 H2_DY_Z = -0.5649469628015424 H2_DZ_X = 0.1510423160922869 H2_DZ_Y = 0.6698018342856784 H2_DZ_Z = -0.727015626748841 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.3747172010202 H3_P_Y = 79.01970778662727 H3_P_Z = 0.6912305995830579 # Orientation: H3_DX_X = -0.4046632601574913 H3_DX_Y = 0.36470502516077374 H3_DX_Z = -0.8385928037499466 H3_DY_X = -0.8330628686683212 H3_DY_Y = 0.23120266521347332 H3_DY_Z = 0.5025451068753122 H3_DZ_X = 0.37716561710320207 H3_DZ_Y = 0.9019620680608824 H3_DZ_Z = 0.2102629902157912 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.0071128209102 H4_P_Y = 64.13689804323381 H4_P_Z = -1.4368153402282786 # Orientation: H4_DX_X = 0.703503804865818 H4_DX_Y = -0.28481561982634673 H4_DX_Z = -0.6511239968256735 H4_DY_X = 0.5552726427369805 H4_DY_Y = -0.3515465430306648 H4_DY_Z = 0.7537156760417294 H4_DZ_X = -0.44357038761305034 H4_DZ_Y = -0.8917931883492543 H4_DZ_Z = -0.08916400869575569 ############# END of Description of junction: j4