#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 149
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  21
S1_NAME_ID3 = 29
S1_NUM_ID5_ORIG =  21
S1_NUM_ID3_ORIG = 29
S1_NAME2_ID5 =  23
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  23
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CGAGC
S1_SQLEN2 = 5
S1_SQ = ACCGAGCCA
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  41
S2_NAME_ID3 = 47
S2_NUM_ID5_ORIG =  41
S2_NUM_ID3_ORIG = 47
S2_NAME2_ID5 =  43
S2_NAME2_ID3 = 45
S2_NUM2_ID5_ORIG =  43
S2_NUM2_ID3_ORIG = 45
S2_SQ2 = GGA
S2_SQLEN2 = 3
S2_SQ = UGGGAGU
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 23
H1_OUTID2_ORIG = 45
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 22.25367692883498
H1_P_Y = 32.394175565346316
H1_P_Z = 44.52298117500803
# Orientation:
H1_DX_X = 0.8215912667585563
H1_DX_Y = -0.1680410821390197
H1_DX_Z = -0.5447476343221851
H1_DY_X = -0.2951715839360318
H1_DY_Y = -0.9428995687366424
H1_DY_Z = -0.15431830517779588
H1_DZ_X = -0.48771049447675807
H1_DZ_Y = 0.2875805939033427
H1_DZ_Z = -0.824279003485735
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 39.262460402352154
H2_P_Y = 33.933611138688775
H2_P_Z = 60.40623035269132
# Orientation:
H2_DX_X = -0.6507150670733495
H2_DX_Y = 0.7113118645193808
H2_DX_Z = 0.26571664019719776
H2_DY_X = -0.49037891689357593
H2_DY_Y = -0.6608461511312171
H2_DY_Z = 0.5681644853397145
H2_DZ_X = 0.5797399583865257
H2_DZ_Y = 0.23941135296603022
H2_DZ_Z = 0.7788348892550729
#############  END of Description of junction: j1