#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS3
FINGERPRINT = 146
LOOP_LENGTH_SUM = 5
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 13
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 13
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 11
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 11
S1_SQ2 = UCAGU
S1_SQLEN2 = 5
S1_SQ = GCUCAGUAC
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  18
S2_NAME_ID3 = 25
S2_NUM_ID5_ORIG =  18
S2_NUM_ID3_ORIG = 25
S2_NAME2_ID5 =  20
S2_NAME2_ID3 = 23
S2_NUM2_ID5_ORIG =  20
S2_NUM2_ID3_ORIG = 23
S2_SQ2 = AACC
S2_SQLEN2 = 4
S2_SQ = GGAACCGC
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 23
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 12.308120629227131
H1_P_Y = 12.782934775749645
H1_P_Z = 54.0986571857599
# Orientation:
H1_DX_X = 0.7223755634118021
H1_DX_Y = 0.6898714158172545
H1_DX_Z = 0.0474444414423445
H1_DY_X = -0.6871677602347273
H1_DY_Y = 0.7084884089071171
H1_DY_Z = 0.16076269386350361
H1_DZ_X = 0.07729175039724012
H1_DZ_Y = -0.14873333211676787
H1_DZ_Z = 0.9858521092121109
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 20
H2_OUTID2_ORIG = 11
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 13.530698374953172
H2_P_Y = 17.69573204542503
H2_P_Z = 25.228886172413905
# Orientation:
H2_DX_X = 0.5212681141627389
H2_DX_Y = -0.7496785165670588
H2_DX_Z = 0.40775197725459833
H2_DY_X = -0.7732982127385739
H2_DY_Y = -0.6170334141311571
H2_DY_Z = -0.14587542637802997
H2_DZ_X = 0.36095626789480484
H2_DZ_Y = -0.23927366684084106
H2_DZ_Z = -0.901364901149357
#############  END of Description of junction: j1