#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 167
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 84.02636232261266
H1_P_Y = 14.800471938495768
H1_P_Z = 19.76949396391444
# Orientation:
H1_DX_X = 0.03517166957136908
H1_DX_Y = -0.4237586168551122
H1_DX_Z = -0.9050920330555385
H1_DY_X = -0.011083465675241655
H1_DY_Y = 0.9054312802661961
H1_DY_Z = -0.42434815129106696
H1_DZ_X = 0.9993198239043295
H1_DZ_Y = 0.02495658944173229
H1_DZ_Z = 0.027148815724604702
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 65.9391882358364
H2_P_Y = 12.899418172032515
H2_P_Z = 18.71882195226359
# Orientation:
H2_DX_X = 0.22365996200507254
H2_DX_Y = -0.9085886000587315
H2_DX_Z = 0.35276476190119155
H2_DY_X = 0.05970695192746689
H2_DY_Y = 0.3740260554367296
H2_DY_Z = 0.925494240795679
H2_DZ_X = -0.9728367289979474
H2_DZ_Y = -0.18593349805172998
H2_DZ_Z = 0.1379037092134432
#############  END of Description of junction: j1