RNAJunction Database - Junction Profile:10307

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10307: 2B9O_j5_A-C58_A-C106_A-A315_A-C337_A-G351

Primary Citation: (from PDB entry 2B9O)

S.PETRY D.E.BRODERSEN F.V.MURPHY IV C.M.DUNHAM M.SELMER M.J.TARRY A.C.KELLEY V.RAMAKRISHNAN CRYSTAL STRUCTURES OF THE RIBOSOME IN COMPLEX WITH RELEASE FACTORS RF1 AND RF2 BOUND TO A COGNATE STOP CODON. CELL (CAMBRIDGE,MASS.) V. 123 1255 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1I94 j5 A-C58 A-C99 A-A310 A-C332 A-G346 
NC-IUBMB Classification:Cluster Page
Angles: 37:66:72:83:105:108:119:120:129:168°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.17689Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCGGACGGGU 11nt

Strand 2: Chain A: UGCAAGUC 8nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt

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