RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10497: 2E5L_j4_A-G944_A-A1236_A-C1296_A-G1334

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information

Type:	4-way	Cluster:	1J5E j4 A-G944 A-A1236 A-C1296 A-G1334
NC-IUBMB Classification:			Cluster Page
Angles:	22:46:63:64:83:100°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.93648Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUACAAUGCC 10nt

Strand 2: Chain A: GUGGAG 6nt

Strand 3: Chain A: GGCCCAGUUCGG 12nt

Strand 4: Chain A: AAGCCGGAAU 10nt