RNAJunction Database - Junction Profile:11378
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11378: 2HGR_j4_A-G115_A-U239_A-G286_A-C311

Primary Citation: (from PDB entry 2HGR)

L.JENNER G.YUSUPOVA B.REES D.MORAS M.YUSUPOV STRUCTURAL BASIS FOR MESSENGER RNA MOVEMENT ON THE RIBOSOME. NATURE V. 444 391 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:2J02 j4 A-G115 A-U239 A-G286 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 60:64:111:119:126:173°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.86261Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCC 6nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: GGGUAGCC 8nt

Strand 4: Chain A: GGCCAC 6nt

Valid XHTML 1.0 Transitional