RNAJunction Database - Junction Profile:11472

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11472: 2HHH_j3_A-G45_A-G353_A-G388

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1XMQ j3 A-G44 A-G357 A-G392 
NC-IUBMB Classification:Cluster Page
Angles: 26:140:157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80803Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAGUUAGGAAUCUUCCG 17nt

Strand 2: Chain A: GCGUGCCUAAGACAUG 16nt

Strand 3: Chain A: CGGAGCGACGC 11nt

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