RNAJunction Database - Junction Profile:1250
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1250: 1IBL_j2_A-C504_A-C526

Primary Citation: (from PDB entry 1IBL)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-C504 A-C526 
NC-IUBMB Classification:2HS14Cluster Page
Angles: 3°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.44798Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCCGCGGUAAUACGGAGGGC 20nt

Strand 2: Chain A: GCCGGC 6nt

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