RNAJunction Database - Junction Profile:2397
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2397: 1K9M_j4_A-C2552_A-G2580_A-A2596_A-A2601

Primary Citation: (from PDB entry 1K9M)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1YIJ j4 0-C2552 0-G2580 0-A2596 0-A2601 
NC-IUBMB Classification:Cluster Page
Angles: 17:47:134:140:161:173°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.5555Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUGA 5nt

Strand 2: Chain A: CCAUCC 6nt

Strand 3: Chain A: UAUU 4nt

Strand 4: Chain A: AAGG 4nt

Valid XHTML 1.0 Transitional