RNAJunction Database - Junction Profile:2515
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2515: 1KC8_j4_A-C2552_A-G2580_A-A2596_A-A2601

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1YIJ j4 0-C2552 0-G2580 0-A2596 0-A2601 
NC-IUBMB Classification:Cluster Page
Angles: 18:48:135:141:159:171°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.52951Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUGA 5nt

Strand 2: Chain A: CCAUCC 6nt

Strand 3: Chain A: UAUU 4nt

Strand 4: Chain A: AAGG 4nt

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