RNAJunction Database - Junction Profile:5307
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5307: 1QVF_j3_0-A2364_0-G2407_0-G2418

Primary Citation: (from PDB entry 1QVF)

T.M.SCHMEING P.B.MOORE T.A.STEITZ STRUCTURES OF DEACYLATED TRNA MIMICS BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT RNA V. 9 1345 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1Q86 j3 A-A2364 A-G2407 A-G2418 
NC-IUBMB Classification:Cluster Page
Angles: 69:133:158°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76013Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGAGCAAAAGAUAGCUUGACAG 22nt

Strand 2: Chain 0: GCGUGGUCU 9nt

Strand 3: Chain 0: CUGACGC 7nt

Valid XHTML 1.0 Transitional