RNAJunction Database - Junction Profile:5664
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5664: 1S1I_j4_3-C2552_3-G2580_3-A2596_3-A2601

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1YIJ j4 0-C2552 0-G2580 0-A2596 0-A2601 
NC-IUBMB Classification:Cluster Page
Angles: 17:46:135:140:161:174°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99488Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: GGUGA 5nt

Strand 2: Chain 3: CCAUCC 6nt

Strand 3: Chain 3: UAUU 4nt

Strand 4: Chain 3: AAGG 4nt

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