RNAJunction Database - Junction Profile:6524
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6524: 1VQ4_j4_0-G1828_0-C1844_0-G1884_0-U2017

Primary Citation: (from PDB entry 1VQ4)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1YI2 j4 0-G1828 0-C1844 0-G1884 0-U2017 
NC-IUBMB Classification:Cluster Page
Angles: 14:20:153:159:168:173°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.66788Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACAUAG 6nt

Strand 2: Chain 0: GGACUGU 7nt

Strand 3: Chain 0: UGAA 4nt

Strand 4: Chain 0: UUAACC 6nt

Valid XHTML 1.0 Transitional