RNAJunction Database - Junction Profile:6841

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6841: 1VQ7_j4_0-C1889_0-C1946_0-C1965_0-A2010

Primary Citation: (from PDB entry 1VQ7)

T.M.SCHMEING T.A.STEITZ AN INDUCED-FIT MECHANISM TO PROMOTE PEPTIDE BOND FORMATION AND EXCLUDE HYDROLYSIS OF PEPTIDYL-TRNA NATURE V. 438 520 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1JJ2 j4 0-C1889 0-C1946 0-C1965 0-A2010 
NC-IUBMB Classification:Cluster Page
Angles: 20:46:63:146:148:156°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.78961Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCGG 4nt

Strand 2: Chain 0: CCUGC 5nt

Strand 3: Chain 0: UCUUAAGGUA 10nt

Strand 4: Chain 0: GAAUGG 6nt

Valid XHTML 1.0 Transitional