RNAJunction Database - Junction Profile:8376
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8376: 1XNR_j2_A-C504_A-C526

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-C504 A-C526 
NC-IUBMB Classification:2HS14Cluster Page
Angles: 2°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.37162Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCCGCGGUAAUACGGAGGGC 20nt

Strand 2: Chain A: GCCGGC 6nt

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