RNAJunction Database - Junction Profile:8445
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8445: 1Y39_j4_D-G306_D-U331_D-A336_D-U351

Primary Citation: (from PDB entry 1Y39)

M.S.DUNSTAN D.GUHATHAKURTA D.E.DRAPER G.L.CONN COEVOLUTION OF PROTEIN AND RNA STRUCTURES WITHIN A HIGHLY CONSERVED RIBOSOMAL DOMAIN CHEM.BIOL. V. 12 201 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1MMS j4 D-G1056 D-U1081 D-A1086 D-U1101 
NC-IUBMB Classification:Cluster Page
Angles: 20:44:141:150:157:167°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.6992Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: AUUU 4nt

Strand 2: Chain D: GGAU 4nt

Strand 3: Chain D: AAGAGUG 7nt

Strand 4: Chain D: CUCAC 5nt

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