RNAJunction Database - Junction Profile:9500
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9500: 1YSH_j2_B-U672_B-C717

Primary Citation: (from PDB entry 1YSH)

M.HALIC T.BECKER J.FRANK C.M.SPAHN R.BECKMANN LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E NAT.STRUCT.MOL.BIOL. V. 12 467 2005

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-U672 A-C717 
NC-IUBMB Classification:2HS16Cluster Page
Angles: 157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.75456Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AACGCCGAUGGCGAAGGCAGCC 22nt

Strand 2: Chain B: GGUGGA 6nt

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