RNAJunction Database - Junction Profile:9812
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9812: 2AAR_j6_0-U2057_0-U2222_0-C2237_0-C2260_0-G2363_0-A2404

Primary Citation: (from PDB entry 2AAR)

D.BARAM E.PYETAN A.SITTNER T.AUERBACH-NEVO A.BASHAN A.YONATH STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY HOMOLOGOUS COMPLEX WITH EUBACTERIAL RIBOSOME REVEALS ITS CHAPERONE ACTION PROC.NATL.ACAD.SCI.USA V. 102 12017 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:6-wayCluster:1NJP j6 0-U2057 0-U2222 0-C2237 0-C2260 0-G2363 0-A2404 
NC-IUBMB Classification:Cluster Page
Angles: 10:29:42:64:65:71:100:104:118:140:145:147:155:162:172°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.35797Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GUUUGA 6nt

Strand 2: Chain 0: CUUUAC 6nt

Strand 3: Chain 0: UCGC 4nt

Strand 4: Chain 0: GCGCCC 6nt

Strand 5: Chain 0: GGCUUAGUGA 10nt

Strand 6: Chain 0: CAACGGAUAAAAG 13nt

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