RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10492: 2E5L_j4_A-G115_A-U239_A-A274_A-C311

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	4-way	Cluster:	1HNW j4 A-G115 A-U239 A-A274 A-C311
NC-IUBMB Classification:			Cluster Page
Angles:	18:64:73:99:109:171°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.78305Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCCAUCAGCUAGUUG 18nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: CAAGGCGACGACGGGUAGCC 20nt

Strand 4: Chain A: GGCCAC 6nt