RNAJunction Database - Junction Profile:12549
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12549: 2OTL_j3_0-C774_0-U866_0-C880

Primary Citation: (from PDB entry 2OTL)

G.BLAHA S.J.SCHROEDER J.TIRADO-RIVES THE STRUCTURES OF ANTIBIOTICS BOUND TO THE E SITE REGION OF THE 50 S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI: 13-DEOXYTEDANOLIDE AND GIRODAZOLE. J.MOL.BIOL. V. 367 1471 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1VQ6 j3 0-C774 0-U866 0-C880 
NC-IUBMB Classification:Cluster Page
Angles: 40:140:144°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.5753Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UGUAGGGGU 9nt

Strand 2: Chain 0: GACGAUCUACG 11nt

Strand 3: Chain 0: GCCCAUCGAGUC 12nt

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