RNAJunction Database - Junction Profile:1935
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1935: 1JZZ_j6_A-U2057_A-U2222_A-U2236_A-C2260_A-G2363_A-G2400

Primary Citation: (from PDB entry 1JZZ)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:6-wayCluster:1K01 j6 A-U2057 A-U2222 A-U2236 A-C2260 A-G2363 A-G2400 
NC-IUBMB Classification:Cluster Page
Angles: 8:31:35:39:42:68:107:138:139:143:146:151:151:167:175°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.38085Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUUUGAC 7nt

Strand 2: Chain A: CUUUAC 6nt

Strand 3: Chain A: GUCGC 5nt

Strand 4: Chain A: GCGCCC 6nt

Strand 5: Chain A: GGCUUAGUGAACCG 14nt

Strand 6: Chain A: CGAUCAACGGAUAAAAG 17nt

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