RNAJunction Database - Junction Profile:3220
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3220: 1N33_j4_A-G115_A-U239_A-G278_A-C311

Primary Citation: (from PDB entry 1N33)

J.M.OGLE F.V.MURPHY IV M.J.TARRY V.RAMAKRISHNAN SELECTION OF TRNA BY THE RIBOSOME REQUIRES A TRANSITION FROM AN OPEN TO A CLOSED FORM CELL (CAMBRIDGE,MASS.) V. 111 721 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1HR0 j4 A-G115 A-U239 A-G278 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 31:67:98:108:151:172°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.83492Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCCAUCAGC 12nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: GCGACGACGGGUAGCC 16nt

Strand 4: Chain A: GGCCAC 6nt

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