RNAJunction Database - Junction Profile:825

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 825: 1HR0_j4_A-G115_A-U239_A-G278_A-C311

Primary Citation: (from PDB entry 1HR0)

A.P.CARTER W.M.CLEMONS JR. D.E.BRODERSEN R.J.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN CRYSTAL STRUCTURE OF AN INITIATION FACTOR BOUND TO THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 291 498 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1HR0 j4 A-G115 A-U239 A-G278 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 33:63:96:110:151:171°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.7116Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCCAUCAGC 12nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: GCGACGACGGGUAGCC 16nt

Strand 4: Chain A: GGCCAC 6nt

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