RNAJunction Database - Junction Profile:3629
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3629: 1NJI_j6_A-U2115_A-U2276_A-U2290_A-C2315_A-G2421_A-G2459

Primary Citation: (from PDB entry 1NJI)

J.L.HANSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:6-wayCluster:1YIJ j6 0-U2115 0-U2276 0-U2290 0-C2315 0-G2421 0-G2459 
NC-IUBMB Classification:Cluster Page
Angles: 4:31:34:36:38:62:108:138:141:145:149:153:154:171:175°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80897Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUUUGAC 7nt

Strand 2: Chain A: CUUUAC 6nt

Strand 3: Chain A: GUACGC 6nt

Strand 4: Chain A: GCGCCC 6nt

Strand 5: Chain A: GGUCUAGCGAACCA 14nt

Strand 6: Chain A: UGAUGACAGAAAAG 14nt

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