RNAJunction Database - Junction Profile:4489

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4489: 1PNS_j5_A-C36_A-C403_A-C436_A-U495_A-C545

Primary Citation: (from PDB entry 1PNS)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2F4V j5 A-C36 A-C403 A-C436 A-U495 A-C545 
NC-IUBMB Classification:Cluster Page
Angles: 9:51:55:84:92:97:99:107:133:141°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99639Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUUGG 6nt

Strand 2: Chain A: GCUGGC 6nt

Strand 3: Chain A: CCUGAA 6nt

Strand 4: Chain A: GUAAUAGC 8nt

Strand 5: Chain A: GCGAGC 6nt

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