RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4744: 1PNY_j6_0-G831_0-G951_0-C982_0-C998_0-G1174_0-G1196

Primary Citation: (from PDB entry 1PNY)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	6-way	Cluster:	1PNY j6 0-G831 0-G951 0-C982 0-C998 0-G1174 0-G1196
NC-IUBMB Classification:			Cluster Page
Angles:	23:39:58:70:71:98:104:109:110:121:131:137:148:149:165°
Fit Criteria:	B
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.94726Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGAGUGAGGC 11nt

Strand 2: Chain 0: CCGAAAUGUAUUGAGGUACAGCCUC 25nt

Strand 3: Chain 0: GCCGAGAGGG 10nt

Strand 4: Chain 0: CCCAGACCA 9nt

Strand 5: Chain 0: UGGAUUCAA 9nt

Strand 6: Chain 0: UUGUCUGGUAGG 12nt