RNAJunction Database - Junction Profile:7887
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7887: 1VS6_j4_B-C1270_B-U1294_B-G1645_B-A2009

Primary Citation: (from PDB entry 1VS6)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2J28 j4 B-C1270 B-U1294 B-G1645 B-A2009 
NC-IUBMB Classification:Cluster Page
Angles: 37:47:134:138:155:171°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.18716Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GCUCGC 6nt

Strand 2: Chain B: AACGAUAAAGC 11nt

Strand 3: Chain B: GCGCUUGA 8nt

Strand 4: Chain B: UCAGUG 6nt

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